Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox2P48432 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Sox2P48432 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Sox2P48432 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sox2P48432 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
Sox2P48432 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.65□□□□□ -0.7
Sox2P48432 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Gm13829-201ENSMUST00000119600 138 ntBASIC10.65□□□□□ -0.7
Sox2P48432 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.65□□□□□ -0.7
Sox2P48432 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Sox2P48432 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox2P48432 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Sox2P48432 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox2P48432 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox2P48432 Gm38117-201ENSMUST00000194653 939 ntBASIC10.65□□□□□ -0.7
Sox2P48432 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Sox2P48432 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.65□□□□□ -0.7
Sox2P48432 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox2P48432 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.65□□□□□ -0.7
Sox2P48432 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sox2P48432 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Sox2P48432 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sox2P48432 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Sox2P48432 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Sox2P48432 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sox2P48432 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox2P48432 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.65□□□□□ -0.71
Sox2P48432 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sox2P48432 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Sox2P48432 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sox2P48432 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Sox2P48432 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.71
Sox2P48432 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sox2P48432 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.65□□□□□ -0.71
Sox2P48432 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sox2P48432 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.64□□□□□ -0.71
Sox2P48432 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sox2P48432 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sox2P48432 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.64□□□□□ -0.71
Sox2P48432 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.64□□□□□ -0.71
Sox2P48432 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Sox2P48432 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.64□□□□□ -0.71
Sox2P48432 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.64□□□□□ -0.71
Sox2P48432 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
Sox2P48432 Gm4310-201ENSMUST00000177847 889 ntBASIC10.64□□□□□ -0.71
Sox2P48432 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sox2P48432 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.64□□□□□ -0.71
Sox2P48432 Gm31256-201ENSMUST00000194705 506 ntBASIC10.64□□□□□ -0.71
Sox2P48432 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sox2P48432 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.64□□□□□ -0.71
Sox2P48432 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms