Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.86□□□□□ -0.67
Cdx2P43241 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Cdx2P43241 Gm9372-201ENSMUST00000168454 430 ntBASIC10.86□□□□□ -0.67
Cdx2P43241 Olfml3-204ENSMUST00000169286 874 ntBASIC10.86□□□□□ -0.67
Cdx2P43241 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC10.86□□□□□ -0.67
Cdx2P43241 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.86□□□□□ -0.67
Cdx2P43241 Gm5340-201ENSMUST00000203733 880 ntBASIC10.86□□□□□ -0.67
Cdx2P43241 Gm43969-201ENSMUST00000204833 535 ntBASIC10.86□□□□□ -0.67
Cdx2P43241 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.86□□□□□ -0.67
Cdx2P43241 Gm45085-201ENSMUST00000209100 441 ntBASIC10.86□□□□□ -0.67
Cdx2P43241 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.86□□□□□ -0.67
Cdx2P43241 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cdx2P43241 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Gm25580-201ENSMUST00000083409 327 ntBASIC10.86□□□□□ -0.67
Cdx2P43241 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Cdx2P43241 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.86□□□□□ -0.67
Cdx2P43241 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdx2P43241 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.86□□□□□ -0.67
Cdx2P43241 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdx2P43241 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Cdx2P43241 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdx2P43241 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.85□□□□□ -0.67
Cdx2P43241 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.85□□□□□ -0.67
Cdx2P43241 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cdx2P43241 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.85□□□□□ -0.67
Cdx2P43241 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
Cdx2P43241 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Gm13981-201ENSMUST00000122360 447 ntBASIC10.85□□□□□ -0.67
Cdx2P43241 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Cdx2P43241 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.85□□□□□ -0.67
Cdx2P43241 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC10.85□□□□□ -0.67
Cdx2P43241 Gm24328-201ENSMUST00000175104 67 ntBASIC10.85□□□□□ -0.67
Cdx2P43241 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdx2P43241 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.85□□□□□ -0.67
Cdx2P43241 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cdx2P43241 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.85□□□□□ -0.67
Cdx2P43241 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.85□□□□□ -0.67
Cdx2P43241 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.85□□□□□ -0.67
Cdx2P43241 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.85□□□□□ -0.67
Cdx2P43241 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cdx2P43241 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.85□□□□□ -0.67
Cdx2P43241 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Cdx2P43241 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdx2P43241 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cdx2P43241 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms