Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm8162-201ENSMUST00000213951 665 ntBASIC11.73□□□□□ -0.53
HttP42859 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
HttP42859 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
HttP42859 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
HttP42859 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HttP42859 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Gm11231-201ENSMUST00000117895 1706 ntBASIC11.73□□□□□ -0.53
HttP42859 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC11.73□□□□□ -0.53
HttP42859 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
HttP42859 Gm6317-201ENSMUST00000183159 1000 ntBASIC11.73□□□□□ -0.53
HttP42859 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.73□□□□□ -0.53
HttP42859 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HttP42859 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.73□□□□□ -0.53
HttP42859 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC11.73□□□□□ -0.53
HttP42859 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Gm9515-201ENSMUST00000200276 647 ntBASIC11.73□□□□□ -0.53
HttP42859 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Gm8615-201ENSMUST00000025307 771 ntBASIC11.73□□□□□ -0.53
HttP42859 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HttP42859 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HttP42859 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
HttP42859 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
HttP42859 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.72□□□□□ -0.53
HttP42859 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC11.72□□□□□ -0.53
HttP42859 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
HttP42859 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
HttP42859 Gm5046-201ENSMUST00000100608 611 ntBASIC11.72□□□□□ -0.53
HttP42859 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 Gm23563-201ENSMUST00000174900 251 ntBASIC11.72□□□□□ -0.53
HttP42859 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 AL844586.1-201ENSMUST00000224297 1042 ntBASIC11.72□□□□□ -0.53
HttP42859 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC11.72□□□□□ -0.53
HttP42859 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
HttP42859 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
HttP42859 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HttP42859 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
HttP42859 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.71□□□□□ -0.53
HttP42859 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
HttP42859 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
HttP42859 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Gm25319-201ENSMUST00000122552 325 ntBASIC11.71□□□□□ -0.53
HttP42859 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC11.71□□□□□ -0.53
HttP42859 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
HttP42859 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
HttP42859 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC11.71□□□□□ -0.53
HttP42859 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
HttP42859 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.71□□□□□ -0.53
HttP42859 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
HttP42859 Gm6342-201ENSMUST00000204344 766 ntBASIC11.71□□□□□ -0.53
HttP42859 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC11.71□□□□□ -0.53
HttP42859 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HttP42859 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms