Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Gm16219-201ENSMUST00000120096 274 ntBASIC10.45□□□□□ -0.74
Nkx2-2P42586 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.45□□□□□ -0.74
Nkx2-2P42586 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.45□□□□□ -0.74
Nkx2-2P42586 Gm10051-201ENSMUST00000145209 414 ntBASIC10.45□□□□□ -0.74
Nkx2-2P42586 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Gm21778-201ENSMUST00000178779 471 ntBASIC10.45□□□□□ -0.74
Nkx2-2P42586 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Gm43378-201ENSMUST00000199336 582 ntBASIC10.45□□□□□ -0.74
Nkx2-2P42586 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.45□□□□□ -0.74
Nkx2-2P42586 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.45□□□□□ -0.74
Nkx2-2P42586 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.45□□□□□ -0.74
Nkx2-2P42586 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Gm5451-201ENSMUST00000080545 579 ntBASIC10.45□□□□□ -0.74
Nkx2-2P42586 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.45□□□□□ -0.74
Nkx2-2P42586 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm8111-201ENSMUST00000117659 987 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm12218-201ENSMUST00000117666 399 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm15432-201ENSMUST00000121106 195 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 B9d1os-201ENSMUST00000137010 674 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm25492-201ENSMUST00000157383 129 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Mir8115-201ENSMUST00000184992 119 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.44□□□□□ -0.74
Nkx2-2P42586 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-2P42586 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms