Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox6P40645 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox6P40645 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox6P40645 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Sox6P40645 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Sox6P40645 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Sox6P40645 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Sox6P40645 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.75□□□□□ -0.69
Sox6P40645 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox6P40645 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.75□□□□□ -0.69
Sox6P40645 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Sox6P40645 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.74□□□□□ -0.69
Sox6P40645 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Sox6P40645 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.74□□□□□ -0.69
Sox6P40645 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Sox6P40645 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Gm12164-201ENSMUST00000121695 551 ntBASIC10.74□□□□□ -0.69
Sox6P40645 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.74□□□□□ -0.69
Sox6P40645 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.74□□□□□ -0.69
Sox6P40645 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
Sox6P40645 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Gm4607-201ENSMUST00000206649 577 ntBASIC10.74□□□□□ -0.69
Sox6P40645 Gm17931-201ENSMUST00000208132 634 ntBASIC10.74□□□□□ -0.69
Sox6P40645 Gm17827-201ENSMUST00000211825 742 ntBASIC10.74□□□□□ -0.69
Sox6P40645 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.74□□□□□ -0.69
Sox6P40645 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.74□□□□□ -0.69
Sox6P40645 Gm8385-201ENSMUST00000058999 643 ntBASIC10.74□□□□□ -0.69
Sox6P40645 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Mir433-201ENSMUST00000093564 124 ntBASIC10.74□□□□□ -0.69
Sox6P40645 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.74□□□□□ -0.69
Sox6P40645 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Sox6P40645 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.74□□□□□ -0.69
Sox6P40645 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.74□□□□□ -0.69
Sox6P40645 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Sox6P40645 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox6P40645 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox6P40645 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.73□□□□□ -0.69
Sox6P40645 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.73□□□□□ -0.69
Sox6P40645 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.73□□□□□ -0.69
Sox6P40645 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox6P40645 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox6P40645 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Sox6P40645 Gm2383-201ENSMUST00000181461 807 ntBASIC10.73□□□□□ -0.69
Sox6P40645 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.73□□□□□ -0.69
Sox6P40645 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.73□□□□□ -0.69
Sox6P40645 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox6P40645 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Sox6P40645 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Sox6P40645 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Sox6P40645 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.73□□□□□ -0.69
Sox6P40645 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 215.5 ms