Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
VhlP40338 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.37□□□□□ -0.91
VhlP40338 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.37□□□□□ -0.91
VhlP40338 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
VhlP40338 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
VhlP40338 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 Gm13392-201ENSMUST00000117708 150 ntBASIC9.37□□□□□ -0.91
VhlP40338 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.37□□□□□ -0.91
VhlP40338 Gm13786-201ENSMUST00000122371 333 ntBASIC9.37□□□□□ -0.91
VhlP40338 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
VhlP40338 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.37□□□□□ -0.91
VhlP40338 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Gm5070-201ENSMUST00000177599 862 ntBASIC9.37□□□□□ -0.91
VhlP40338 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.37□□□□□ -0.91
VhlP40338 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.37□□□□□ -0.91
VhlP40338 Gm37489-201ENSMUST00000191883 159 ntBASIC9.37□□□□□ -0.91
VhlP40338 Gm4857-201ENSMUST00000192718 785 ntBASIC9.37□□□□□ -0.91
VhlP40338 Gm38117-201ENSMUST00000194653 939 ntBASIC9.37□□□□□ -0.91
VhlP40338 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.37□□□□□ -0.91
VhlP40338 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.37□□□□□ -0.91
VhlP40338 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
VhlP40338 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VhlP40338 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.36□□□□□ -0.91
VhlP40338 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
VhlP40338 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
VhlP40338 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
VhlP40338 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
VhlP40338 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
VhlP40338 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
VhlP40338 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
VhlP40338 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms