Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm8661-201ENSMUST00000118688 992 ntBASIC16.73■□□□□ 0.27
Chd1P40201 Gm12420-201ENSMUST00000119869 1048 ntBASIC16.73■□□□□ 0.27
Chd1P40201 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC16.73■□□□□ 0.27
Chd1P40201 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC16.73■□□□□ 0.27
Chd1P40201 Gm23521-201ENSMUST00000177845 110 ntBASIC16.73■□□□□ 0.27
Chd1P40201 Gm43965-201ENSMUST00000203779 789 ntBASIC16.73■□□□□ 0.27
Chd1P40201 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chd1P40201 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC16.73■□□□□ 0.27
Chd1P40201 Gm10689-201ENSMUST00000098864 432 ntBASIC16.73■□□□□ 0.27
Chd1P40201 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.73■□□□□ 0.27
Chd1P40201 Gm38312-201ENSMUST00000195426 1746 ntBASIC16.73■□□□□ 0.27
Chd1P40201 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC16.73■□□□□ 0.27
Chd1P40201 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Gm6425-201ENSMUST00000136332 790 ntBASIC16.73■□□□□ 0.27
Chd1P40201 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC16.73■□□□□ 0.27
Chd1P40201 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Chd1P40201 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC16.73■□□□□ 0.27
Chd1P40201 Gm38313-201ENSMUST00000191953 1266 ntBASIC16.73■□□□□ 0.27
Chd1P40201 AC163351.1-201ENSMUST00000225539 737 ntBASIC16.73■□□□□ 0.27
Chd1P40201 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chd1P40201 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Chd1P40201 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1P40201 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1P40201 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1P40201 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1P40201 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.72■□□□□ 0.27
Chd1P40201 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chd1P40201 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1P40201 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chd1P40201 Gm4865-201ENSMUST00000196284 1309 ntBASIC16.72■□□□□ 0.27
Chd1P40201 AC132833.1-202ENSMUST00000228875 1690 ntBASIC16.72■□□□□ 0.27
Chd1P40201 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Chd1P40201 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1P40201 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1P40201 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1P40201 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Chd1P40201 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC16.72■□□□□ 0.27
Chd1P40201 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1P40201 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC16.72■□□□□ 0.27
Chd1P40201 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC16.72■□□□□ 0.27
Chd1P40201 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC16.72■□□□□ 0.27
Chd1P40201 Gm6378-201ENSMUST00000084199 444 ntBASIC16.72■□□□□ 0.27
Chd1P40201 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1P40201 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Chd1P40201 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Chd1P40201 AC154517.2-201ENSMUST00000220829 2458 ntBASIC16.72■□□□□ 0.27
Chd1P40201 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chd1P40201 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Gm14538-201ENSMUST00000122019 1327 ntBASIC16.71■□□□□ 0.27
Chd1P40201 Adgrv1-214ENSMUST00000224088 1492 ntBASIC16.71■□□□□ 0.27
Chd1P40201 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd1P40201 Gm23899-201ENSMUST00000158112 90 ntBASIC16.71■□□□□ 0.27
Chd1P40201 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Gm28746-201ENSMUST00000187453 380 ntBASIC16.71■□□□□ 0.27
Chd1P40201 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Chd1P40201 Gm32102-201ENSMUST00000196885 241 ntBASIC16.71■□□□□ 0.27
Chd1P40201 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd1P40201 Gm43622-201ENSMUST00000200140 2019 ntBASIC16.71■□□□□ 0.27
Chd1P40201 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd1P40201 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Chd1P40201 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC16.71■□□□□ 0.27
Chd1P40201 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chd1P40201 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Chd1P40201 AC154640.1-203ENSMUST00000228316 1618 ntBASIC16.71■□□□□ 0.27
Chd1P40201 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Chd1P40201 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chd1P40201 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chd1P40201 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Chd1P40201 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC16.71■□□□□ 0.26
Chd1P40201 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chd1P40201 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Chd1P40201 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chd1P40201 Gm13377-201ENSMUST00000137984 683 ntBASIC16.7■□□□□ 0.26
Chd1P40201 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC16.7■□□□□ 0.26
Chd1P40201 Gm9578-201ENSMUST00000182354 753 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms