Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rfc1P35601 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.03□□□□□ -0.48
Rfc1P35601 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.03□□□□□ -0.48
Rfc1P35601 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rfc1P35601 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rfc1P35601 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Rfc1P35601 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfc1P35601 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.02□□□□□ -0.48
Rfc1P35601 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.02□□□□□ -0.48
Rfc1P35601 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfc1P35601 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfc1P35601 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rfc1P35601 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rfc1P35601 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.02□□□□□ -0.49
Rfc1P35601 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rfc1P35601 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Gm15610-201ENSMUST00000120584 195 ntBASIC12.02□□□□□ -0.49
Rfc1P35601 Gm25043-201ENSMUST00000158604 212 ntBASIC12.02□□□□□ -0.49
Rfc1P35601 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.02□□□□□ -0.49
Rfc1P35601 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Rfc1P35601 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.02□□□□□ -0.49
Rfc1P35601 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Rfc1P35601 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.02□□□□□ -0.49
Rfc1P35601 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.02□□□□□ -0.49
Rfc1P35601 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.02□□□□□ -0.49
Rfc1P35601 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.02□□□□□ -0.49
Rfc1P35601 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rfc1P35601 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.02□□□□□ -0.49
Rfc1P35601 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rfc1P35601 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.02□□□□□ -0.49
Rfc1P35601 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Rfc1P35601 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rfc1P35601 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rfc1P35601 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rfc1P35601 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rfc1P35601 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rfc1P35601 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.01□□□□□ -0.49
Rfc1P35601 Gm13786-201ENSMUST00000122371 333 ntBASIC12.01□□□□□ -0.49
Rfc1P35601 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Rfc1P35601 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rfc1P35601 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rfc1P35601 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.01□□□□□ -0.49
Rfc1P35601 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Rfc1P35601 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.01□□□□□ -0.49
Rfc1P35601 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rfc1P35601 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Rfc1P35601 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Gm44798-201ENSMUST00000208123 2410 ntBASIC12.01□□□□□ -0.49
Rfc1P35601 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC12.01□□□□□ -0.49
Rfc1P35601 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Rfc1P35601 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rfc1P35601 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Rfc1P35601 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rfc1P35601 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Gm8752-201ENSMUST00000173427 1694 ntBASIC12□□□□□ -0.49
Rfc1P35601 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms