Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
VimP20152 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
VimP20152 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VimP20152 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
VimP20152 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
VimP20152 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
VimP20152 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.52□□□□□ -0.56
VimP20152 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.52□□□□□ -0.56
VimP20152 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC11.52□□□□□ -0.56
VimP20152 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
VimP20152 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
VimP20152 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
VimP20152 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
VimP20152 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.52□□□□□ -0.57
VimP20152 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
VimP20152 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.52□□□□□ -0.57
VimP20152 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.52□□□□□ -0.57
VimP20152 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.52□□□□□ -0.57
VimP20152 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.52□□□□□ -0.57
VimP20152 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.52□□□□□ -0.57
VimP20152 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
VimP20152 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.52□□□□□ -0.57
VimP20152 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
VimP20152 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VimP20152 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
VimP20152 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
VimP20152 Gm12058-201ENSMUST00000118614 437 ntBASIC11.51□□□□□ -0.57
VimP20152 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.51□□□□□ -0.57
VimP20152 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.51□□□□□ -0.57
VimP20152 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.51□□□□□ -0.57
VimP20152 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.51□□□□□ -0.57
VimP20152 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.51□□□□□ -0.57
VimP20152 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
VimP20152 Gm18065-201ENSMUST00000221395 526 ntBASIC11.51□□□□□ -0.57
VimP20152 Gm5867-201ENSMUST00000063197 592 ntBASIC11.51□□□□□ -0.57
VimP20152 Gm10268-201ENSMUST00000085340 555 ntBASIC11.51□□□□□ -0.57
VimP20152 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
VimP20152 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
VimP20152 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.51□□□□□ -0.57
VimP20152 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.51□□□□□ -0.57
VimP20152 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
VimP20152 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
VimP20152 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
VimP20152 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.51□□□□□ -0.57
VimP20152 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VimP20152 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
VimP20152 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
VimP20152 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.51□□□□□ -0.57
VimP20152 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
VimP20152 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
VimP20152 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC11.5□□□□□ -0.57
VimP20152 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC11.5□□□□□ -0.57
VimP20152 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.5□□□□□ -0.57
VimP20152 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
VimP20152 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.5□□□□□ -0.57
VimP20152 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.5□□□□□ -0.57
VimP20152 Gm26927-201ENSMUST00000182385 965 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms