Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.61□□□□□ -0.55
Hmga1P17095 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.61□□□□□ -0.55
Hmga1P17095 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.61□□□□□ -0.55
Hmga1P17095 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.61□□□□□ -0.55
Hmga1P17095 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hmga1P17095 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hmga1P17095 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Hmga1P17095 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hmga1P17095 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.6□□□□□ -0.55
Hmga1P17095 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Hmga1P17095 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.6□□□□□ -0.55
Hmga1P17095 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.6□□□□□ -0.55
Hmga1P17095 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.6□□□□□ -0.55
Hmga1P17095 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Gm9102-201ENSMUST00000219250 465 ntBASIC11.6□□□□□ -0.55
Hmga1P17095 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Hmga1P17095 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Hmga1P17095 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Hmga1P17095 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.6□□□□□ -0.55
Hmga1P17095 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.6□□□□□ -0.55
Hmga1P17095 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.6□□□□□ -0.55
Hmga1P17095 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Hmga1P17095 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.6□□□□□ -0.55
Hmga1P17095 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hmga1P17095 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmga1P17095 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmga1P17095 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hmga1P17095 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.59□□□□□ -0.55
Hmga1P17095 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmga1P17095 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmga1P17095 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hmga1P17095 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.59□□□□□ -0.55
Hmga1P17095 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Hmga1P17095 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hmga1P17095 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hmga1P17095 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmga1P17095 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.59□□□□□ -0.55
Hmga1P17095 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Hmga1P17095 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.59□□□□□ -0.55
Hmga1P17095 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmga1P17095 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.59□□□□□ -0.55
Hmga1P17095 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.59□□□□□ -0.55
Hmga1P17095 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hmga1P17095 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Hmga1P17095 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms