Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.76□□□□□ -0.69
Matn4O89029 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.76□□□□□ -0.69
Matn4O89029 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.76□□□□□ -0.69
Matn4O89029 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.76□□□□□ -0.69
Matn4O89029 Mir8109-201ENSMUST00000184375 117 ntBASIC10.76□□□□□ -0.69
Matn4O89029 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.76□□□□□ -0.69
Matn4O89029 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.76□□□□□ -0.69
Matn4O89029 Gm6867-201ENSMUST00000219165 425 ntBASIC10.76□□□□□ -0.69
Matn4O89029 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Matn4O89029 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Matn4O89029 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.76□□□□□ -0.69
Matn4O89029 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Matn4O89029 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.76□□□□□ -0.69
Matn4O89029 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Matn4O89029 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Matn4O89029 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Matn4O89029 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Matn4O89029 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Matn4O89029 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Matn4O89029 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Matn4O89029 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Matn4O89029 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Matn4O89029 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.75□□□□□ -0.69
Matn4O89029 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Matn4O89029 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.75□□□□□ -0.69
Matn4O89029 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Matn4O89029 Gm13665-201ENSMUST00000120830 528 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm8459-201ENSMUST00000162504 760 ntBASIC10.75□□□□□ -0.69
Matn4O89029 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.75□□□□□ -0.69
Matn4O89029 Gm8815-201ENSMUST00000173809 620 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Matn4O89029 Mir7677-201ENSMUST00000184226 67 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Gm29615-201ENSMUST00000185371 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm28224-201ENSMUST00000186078 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm29001-201ENSMUST00000186177 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm28292-201ENSMUST00000186593 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm28101-201ENSMUST00000187608 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm29076-201ENSMUST00000187689 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm28302-201ENSMUST00000187931 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm28646-201ENSMUST00000188220 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm28205-201ENSMUST00000189177 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm3332-201ENSMUST00000189337 928 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm29032-201ENSMUST00000189797 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm28695-201ENSMUST00000190300 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm37448-201ENSMUST00000192795 697 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm37666-201ENSMUST00000194110 866 ntBASIC10.75□□□□□ -0.69
Matn4O89029 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Gm18038-201ENSMUST00000197900 485 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Gm6722-201ENSMUST00000221586 390 ntBASIC10.75□□□□□ -0.69
Matn4O89029 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Matn4O89029 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Matn4O89029 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.75□□□□□ -0.69
Matn4O89029 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.75□□□□□ -0.69
Matn4O89029 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Matn4O89029 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Matn4O89029 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.74□□□□□ -0.69
Matn4O89029 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Matn4O89029 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Matn4O89029 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms