Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm38017-201ENSMUST00000194768 695 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Gm37287-201ENSMUST00000195449 695 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Gm37793-201ENSMUST00000195548 695 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Gm43378-201ENSMUST00000199336 582 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Gm6905-201ENSMUST00000205729 511 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Spcs1-203ENSMUST00000226374 592 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Ntng1-201ENSMUST00000051253 327 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Atf6bO35451 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Atf6bO35451 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Atf6bO35451 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Atf6bO35451 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Atf6bO35451 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Atf6bO35451 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Atf6bO35451 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Atf6bO35451 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.97□□□□□ -0.81
Atf6bO35451 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Atf6bO35451 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Atf6bO35451 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Atf6bO35451 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Atf6bO35451 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Atf6bO35451 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Atf6bO35451 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.96□□□□□ -0.81
Atf6bO35451 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Atf6bO35451 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.96□□□□□ -0.81
Atf6bO35451 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Atf6bO35451 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Atf6bO35451 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.96□□□□□ -0.81
Atf6bO35451 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Atf6bO35451 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Atf6bO35451 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.96□□□□□ -0.81
Atf6bO35451 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Atf6bO35451 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Atf6bO35451 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Atf6bO35451 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.96□□□□□ -0.82
Atf6bO35451 Gm18753-201ENSMUST00000201000 566 ntBASIC9.96□□□□□ -0.82
Atf6bO35451 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
Atf6bO35451 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.96□□□□□ -0.82
Atf6bO35451 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
Atf6bO35451 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Gm7940-201ENSMUST00000218195 769 ntBASIC9.96□□□□□ -0.82
Atf6bO35451 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.96□□□□□ -0.82
Atf6bO35451 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Atf6bO35451 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Atf6bO35451 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Atf6bO35451 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Atf6bO35451 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Atf6bO35451 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Atf6bO35451 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Atf6bO35451 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms