Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm6564-201ENSMUST00000075377 619 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm16459-201ENSMUST00000121443 686 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm20495-201ENSMUST00000173902 235 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm25677-201ENSMUST00000174983 72 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Mir7035-201ENSMUST00000184713 82 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm44323-201ENSMUST00000198689 129 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm45094-201ENSMUST00000207013 617 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm18041-201ENSMUST00000218210 618 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Gm7525-201ENSMUST00000219425 454 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 AC138716.2-201ENSMUST00000226670 1016 ntBASIC10.26□□□□□ -0.77
Shank1D3YZU1 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Shank1D3YZU1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Gm7985-201ENSMUST00000183329 981 ntBASIC10.25□□□□□ -0.77
Shank1D3YZU1 Gm5468-202ENSMUST00000227851 682 ntBASIC10.25□□□□□ -0.77
Shank1D3YZU1 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Gm23255-201ENSMUST00000102244 110 ntBASIC10.25□□□□□ -0.77
Shank1D3YZU1 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Gm9791-201ENSMUST00000060997 447 ntBASIC10.25□□□□□ -0.77
Shank1D3YZU1 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.25□□□□□ -0.77
Shank1D3YZU1 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Shank1D3YZU1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Shank1D3YZU1 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms