Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.19□□□□□ -0.62
Chd3B1AR17 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm23153-201ENSMUST00000175323 313 ntBASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm26134-201ENSMUST00000178484 110 ntBASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm34379-201ENSMUST00000195036 290 ntBASIC11.19□□□□□ -0.62
Chd3B1AR17 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm8894-201ENSMUST00000074642 666 ntBASIC11.19□□□□□ -0.62
Chd3B1AR17 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Chd3B1AR17 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chd3B1AR17 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Pck2-205ENSMUST00000226352 2784 ntBASIC11.19□□□□□ -0.62
Chd3B1AR17 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.19□□□□□ -0.62
Chd3B1AR17 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chd3B1AR17 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Chd3B1AR17 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.19□□□□□ -0.62
Chd3B1AR17 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Chd3B1AR17 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Chd3B1AR17 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.18□□□□□ -0.62
Chd3B1AR17 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd3B1AR17 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 Gm12218-201ENSMUST00000117666 399 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Gm3329-201ENSMUST00000159873 556 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chd3B1AR17 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Chd3B1AR17 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd3B1AR17 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Chd3B1AR17 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Chd3B1AR17 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Chd3B1AR17 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Chd3B1AR17 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Chd3B1AR17 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.18□□□□□ -0.62
Chd3B1AR17 Mir6407-201ENSMUST00000184510 101 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Gm5468-202ENSMUST00000227851 682 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Chd3B1AR17 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.18□□□□□ -0.62
Chd3B1AR17 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Chd3B1AR17 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.17□□□□□ -0.62
Chd3B1AR17 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.17□□□□□ -0.62
Chd3B1AR17 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chd3B1AR17 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Chd3B1AR17 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms