Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd2l1A2A259 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Gm26286-201ENSMUST00000104166 134 ntBASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Gm2965-201ENSMUST00000198365 343 ntBASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Gm18711-201ENSMUST00000199341 750 ntBASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd2l1A2A259 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Gm13888-201ENSMUST00000119148 422 ntBASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Gm10774-201ENSMUST00000188689 204 ntBASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.22□□□□□ -0.61
Pkd2l1A2A259 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd2l1A2A259 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms