Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Gm42460-201ENSMUST00000198863 2567 ntBASIC9.09□□□□□ -0.95
Smco4Q9JIS3 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.96
Smco4Q9JIS3 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Ap1g1-206ENSMUST00000179104 1096 ntBASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gm18304-201ENSMUST00000189162 546 ntBASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gm5264-201ENSMUST00000190584 848 ntBASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.08□□□□□ -0.96
Smco4Q9JIS3 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gm9797-201ENSMUST00000052902 613 ntBASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gm20445-201ENSMUST00000061905 565 ntBASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smco4Q9JIS3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 AC115746.1-201ENSMUST00000228949 3617 ntBASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Gm5687-201ENSMUST00000118252 640 ntBASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Gm44958-201ENSMUST00000203734 736 ntBASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Gm6983-201ENSMUST00000214912 628 ntBASIC9.07□□□□□ -0.96
Smco4Q9JIS3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smco4Q9JIS3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms