Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim54Q9ERP3 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Gm10169-201ENSMUST00000121822 348 ntBASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Gm43380-201ENSMUST00000200421 220 ntBASIC12.41□□□□□ -0.42
Trim54Q9ERP3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Gm18059-201ENSMUST00000208073 580 ntBASIC12.41□□□□□ -0.42
Trim54Q9ERP3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim54Q9ERP3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Gm4294-201ENSMUST00000105169 614 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Gm14807-201ENSMUST00000116640 983 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Gm18065-201ENSMUST00000221395 526 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim54Q9ERP3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim54Q9ERP3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Trim54Q9ERP3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim54Q9ERP3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Trim54Q9ERP3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim54Q9ERP3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim54Q9ERP3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim54Q9ERP3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim54Q9ERP3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim54Q9ERP3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim54Q9ERP3 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.39□□□□□ -0.43
Trim54Q9ERP3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim54Q9ERP3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim54Q9ERP3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim54Q9ERP3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms