Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm7666-201ENSMUST00000146631 819 ntBASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm20495-201ENSMUST00000173902 235 ntBASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm18367-201ENSMUST00000176139 600 ntBASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm7504-201ENSMUST00000201449 424 ntBASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Lect2-202ENSMUST00000225183 823 ntBASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chmp2aQ9DB34 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Gm11500-201ENSMUST00000118237 601 ntBASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Gm9211-201ENSMUST00000182882 975 ntBASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Gm3786-201ENSMUST00000202659 378 ntBASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.92□□□□□ -0.5
Chmp2aQ9DB34 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Gm12247-201ENSMUST00000117585 670 ntBASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Mir1943-201ENSMUST00000158276 73 ntBASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Gm44506-201ENSMUST00000206278 965 ntBASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms