Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Gm2965-201ENSMUST00000198365 343 ntBASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gtf3c6Q9D8P7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Gm11783-201ENSMUST00000119549 885 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Gm12196-201ENSMUST00000120954 262 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Gm10807-201ENSMUST00000177134 795 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Gm28686-201ENSMUST00000187404 609 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 AC132467.2-201ENSMUST00000226306 2253 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Il20rb-201ENSMUST00000098458 2793 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Gtf3c6Q9D8P7 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Sdc2-201ENSMUST00000022871 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.4□□□□□ -0.42
Gtf3c6Q9D8P7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms