Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm14644-201ENSMUST00000116671 647 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm11989-201ENSMUST00000117240 672 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm11362-201ENSMUST00000118838 850 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Mir1938-201ENSMUST00000158746 100 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Mospd4-201ENSMUST00000180618 576 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm27572-201ENSMUST00000183702 255 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm38158-201ENSMUST00000194617 339 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm19287-201ENSMUST00000203190 358 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trim13Q9CYB0 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.57□□□□□ -0.72
Trim13Q9CYB0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm25214-201ENSMUST00000104573 129 ntBASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm43133-201ENSMUST00000197472 463 ntBASIC10.57□□□□□ -0.72
Trim13Q9CYB0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trim13Q9CYB0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms