Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Gm19353-201ENSMUST00000184561 445 ntBASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Gm8342-201ENSMUST00000209839 757 ntBASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rpa3Q9CQ71 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm13045-201ENSMUST00000119019 712 ntBASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm43378-201ENSMUST00000199336 582 ntBASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm43852-201ENSMUST00000202098 917 ntBASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm10254-201ENSMUST00000052888 867 ntBASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rpa3Q9CQ71 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Rpa3Q9CQ71 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rpa3Q9CQ71 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Erich3-203ENSMUST00000189969 3460 ntBASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rpa3Q9CQ71 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms