Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Prpf8Q99PV0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm11500-201ENSMUST00000118237 601 ntBASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm45758-201ENSMUST00000212448 1006 ntBASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 n-R5s185-201ENSMUST00000083953 119 ntBASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Prpf8Q99PV0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Prpf8Q99PV0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Prpf8Q99PV0 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Prpf8Q99PV0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Prpf8Q99PV0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.4□□□□□ -0.91
Prpf8Q99PV0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Prpf8Q99PV0 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.4□□□□□ -0.91
Prpf8Q99PV0 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gm15620-201ENSMUST00000122949 270 ntBASIC9.39□□□□□ -0.91
Prpf8Q99PV0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gm5700-201ENSMUST00000191483 989 ntBASIC9.39□□□□□ -0.91
Prpf8Q99PV0 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gm12274-201ENSMUST00000120062 385 ntBASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gm18776-201ENSMUST00000188833 654 ntBASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gm17825-201ENSMUST00000206836 794 ntBASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gm44647-201ENSMUST00000207402 428 ntBASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Gm40879-201ENSMUST00000220759 612 ntBASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Prpf8Q99PV0 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms