Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.09□□□□□ -0.79
Scrt1Q99M85 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Scrt1Q99M85 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm23912-201ENSMUST00000104687 87 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm14247-201ENSMUST00000120950 237 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm3150-201ENSMUST00000166418 204 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm12407-201ENSMUST00000180219 324 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm18499-201ENSMUST00000220808 1021 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Scrt1Q99M85 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.08□□□□□ -0.8
Scrt1Q99M85 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm25766-201ENSMUST00000104101 131 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm12943-201ENSMUST00000119616 210 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm11979-201ENSMUST00000119629 743 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm13117-201ENSMUST00000120894 691 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm25604-201ENSMUST00000158359 133 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm9135-201ENSMUST00000182963 990 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm44315-201ENSMUST00000203041 219 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm18460-201ENSMUST00000208088 464 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm18514-201ENSMUST00000218980 436 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Gm16380-201ENSMUST00000077997 478 ntBASIC10.07□□□□□ -0.8
Scrt1Q99M85 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Scrt1Q99M85 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms