Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cstf3Q99LI7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Gm10807-201ENSMUST00000177134 795 ntBASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Gm8385-201ENSMUST00000058999 643 ntBASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cstf3Q99LI7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cstf3Q99LI7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Gm44008-201ENSMUST00000204345 412 ntBASIC11.05□□□□□ -0.64
Cstf3Q99LI7 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms