Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdk9Q99J95 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdk9Q99J95 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdk9Q99J95 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdk9Q99J95 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.52□□□□□ -0.56
Cdk9Q99J95 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdk9Q99J95 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdk9Q99J95 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdk9Q99J95 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm4986-201ENSMUST00000119731 549 ntBASIC11.52□□□□□ -0.57
Cdk9Q99J95 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm43822-201ENSMUST00000200285 476 ntBASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.52□□□□□ -0.57
Cdk9Q99J95 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.52□□□□□ -0.57
Cdk9Q99J95 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdk9Q99J95 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.51□□□□□ -0.57
Cdk9Q99J95 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gm15370-201ENSMUST00000117158 253 ntBASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gm13297-201ENSMUST00000120205 934 ntBASIC11.51□□□□□ -0.57
Cdk9Q99J95 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.51□□□□□ -0.57
Cdk9Q99J95 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.51□□□□□ -0.57
Cdk9Q99J95 Cts7-204ENSMUST00000225321 1257 ntBASIC11.51□□□□□ -0.57
Cdk9Q99J95 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdk9Q99J95 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms