Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.28□□□□□ -0.28
Smc1bQ920F6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm16166-201ENSMUST00000118291 787 ntBASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm15207-201ENSMUST00000119259 442 ntBASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm12783-201ENSMUST00000121425 397 ntBASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm44506-201ENSMUST00000206278 965 ntBASIC13.28□□□□□ -0.28
Smc1bQ920F6 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.28□□□□□ -0.28
Smc1bQ920F6 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.28□□□□□ -0.28
Smc1bQ920F6 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.28□□□□□ -0.28
Smc1bQ920F6 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.28□□□□□ -0.28
Smc1bQ920F6 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smc1bQ920F6 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smc1bQ920F6 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smc1bQ920F6 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smc1bQ920F6 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smc1bQ920F6 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.27□□□□□ -0.28
Smc1bQ920F6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Smc1bQ920F6 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smc1bQ920F6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Smc1bQ920F6 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Gm12164-201ENSMUST00000121695 551 ntBASIC13.27□□□□□ -0.29
Smc1bQ920F6 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.27□□□□□ -0.29
Smc1bQ920F6 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Gm43852-201ENSMUST00000202098 917 ntBASIC13.27□□□□□ -0.29
Smc1bQ920F6 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Mt1-202ENSMUST00000211807 1085 ntBASIC13.27□□□□□ -0.29
Smc1bQ920F6 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.27□□□□□ -0.29
Smc1bQ920F6 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.27□□□□□ -0.29
Smc1bQ920F6 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.27□□□□□ -0.29
Smc1bQ920F6 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1bQ920F6 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.27□□□□□ -0.29
Smc1bQ920F6 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smc1bQ920F6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Gm23912-201ENSMUST00000104687 87 ntBASIC13.26□□□□□ -0.29
Smc1bQ920F6 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smc1bQ920F6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms