Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb1Q91Y08 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Gm15549-201ENSMUST00000121595 622 ntBASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Gm22846-201ENSMUST00000157706 270 ntBASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Olfml3-204ENSMUST00000169286 874 ntBASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Nsd1-205ENSMUST00000224693 852 ntBASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb1Q91Y08 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Gm15617-201ENSMUST00000118973 771 ntBASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Gm15329-201ENSMUST00000121408 155 ntBASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Gm7741-201ENSMUST00000181445 989 ntBASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Gm10774-201ENSMUST00000188689 204 ntBASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Gm9353-201ENSMUST00000200472 604 ntBASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.86□□□□□ -0.51
Pcdhb1Q91Y08 Ginm1-202ENSMUST00000065124 300 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms