Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb17Q91VD8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb17Q91VD8 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Mterf4-201ENSMUST00000027492 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Olfr700-202ENSMUST00000214840 1505 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Tpt1-ps2-201ENSMUST00000120548 521 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm11988-201ENSMUST00000122321 1069 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm5070-201ENSMUST00000177599 862 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm25890-201ENSMUST00000177643 165 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm22614-201ENSMUST00000178300 165 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm27390-201ENSMUST00000184516 176 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 AL713985.1-201ENSMUST00000219030 420 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 AC099612.2-201ENSMUST00000226824 721 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm22042-201ENSMUST00000082989 165 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm26110-201ENSMUST00000083971 165 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm14445-201ENSMUST00000117051 1484 ntBASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 2810403D21Rik-209ENSMUST00000207966 1433 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb17Q91VD8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gm37886-201ENSMUST00000195349 1513 ntBASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gm23912-201ENSMUST00000104687 87 ntBASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gm11991-201ENSMUST00000119652 1074 ntBASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gm13665-201ENSMUST00000120830 528 ntBASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gm23819-201ENSMUST00000158744 109 ntBASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gm37000-201ENSMUST00000193058 428 ntBASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Rprl1-202ENSMUST00000198476 238 ntBASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Gzmn-202ENSMUST00000225535 989 ntBASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb17Q91VD8 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms