Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm43097-201ENSMUST00000196867 151 ntBASIC13.27□□□□□ -0.29
StrcQ8VIM6 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
StrcQ8VIM6 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC13.27□□□□□ -0.29
StrcQ8VIM6 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC13.27□□□□□ -0.29
StrcQ8VIM6 AC164614.1-201ENSMUST00000216038 397 ntBASIC13.27□□□□□ -0.29
StrcQ8VIM6 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.27□□□□□ -0.29
StrcQ8VIM6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
StrcQ8VIM6 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
StrcQ8VIM6 Atf7-201ENSMUST00000096143 390 ntBASIC13.27□□□□□ -0.29
StrcQ8VIM6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
StrcQ8VIM6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
StrcQ8VIM6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
StrcQ8VIM6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
StrcQ8VIM6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.26□□□□□ -0.29
StrcQ8VIM6 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC13.26□□□□□ -0.29
StrcQ8VIM6 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Mir3091-201ENSMUST00000175086 76 ntBASIC13.26□□□□□ -0.29
StrcQ8VIM6 Gm25694-201ENSMUST00000175448 282 ntBASIC13.26□□□□□ -0.29
StrcQ8VIM6 Gm17797-201ENSMUST00000182175 997 ntBASIC13.26□□□□□ -0.29
StrcQ8VIM6 Gm18124-201ENSMUST00000210695 706 ntBASIC13.26□□□□□ -0.29
StrcQ8VIM6 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.26□□□□□ -0.29
StrcQ8VIM6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
StrcQ8VIM6 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.25□□□□□ -0.29
StrcQ8VIM6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm18443-201ENSMUST00000185358 556 ntBASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm38145-201ENSMUST00000192319 693 ntBASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Saa-ps-201ENSMUST00000211148 320 ntBASIC13.25□□□□□ -0.29
StrcQ8VIM6 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm13120-201ENSMUST00000117343 1446 ntBASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm13104-201ENSMUST00000119651 1446 ntBASIC13.25□□□□□ -0.29
StrcQ8VIM6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.25□□□□□ -0.29
StrcQ8VIM6 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm11544-201ENSMUST00000120215 382 ntBASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm14699-201ENSMUST00000122340 228 ntBASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm5766-202ENSMUST00000161633 799 ntBASIC13.25□□□□□ -0.29
StrcQ8VIM6 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm37944-201ENSMUST00000194233 414 ntBASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.25□□□□□ -0.29
StrcQ8VIM6 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
StrcQ8VIM6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms