Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smc5Q8CG46 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smc5Q8CG46 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc5Q8CG46 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smc5Q8CG46 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc5Q8CG46 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smc5Q8CG46 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC14.1□□□□□ -0.15
Smc5Q8CG46 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smc5Q8CG46 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.09□□□□□ -0.15
Smc5Q8CG46 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Gm19327-201ENSMUST00000220651 3271 ntBASIC14.09□□□□□ -0.15
Smc5Q8CG46 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Gm5171-201ENSMUST00000214944 1415 ntBASIC14.09□□□□□ -0.15
Smc5Q8CG46 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Gm12579-201ENSMUST00000118040 783 ntBASIC14.09□□□□□ -0.15
Smc5Q8CG46 Gm18734-201ENSMUST00000172937 808 ntBASIC14.09□□□□□ -0.15
Smc5Q8CG46 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Gm4857-201ENSMUST00000192718 785 ntBASIC14.09□□□□□ -0.15
Smc5Q8CG46 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.09□□□□□ -0.15
Smc5Q8CG46 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smc5Q8CG46 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smc5Q8CG46 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smc5Q8CG46 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smc5Q8CG46 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smc5Q8CG46 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Snord17-201ENSMUST00000104526 238 ntBASIC14.08□□□□□ -0.16
Smc5Q8CG46 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Gm14723-201ENSMUST00000118686 215 ntBASIC14.08□□□□□ -0.16
Smc5Q8CG46 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.08□□□□□ -0.16
Smc5Q8CG46 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Mrip-ps-201ENSMUST00000184613 940 ntBASIC14.08□□□□□ -0.16
Smc5Q8CG46 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.08□□□□□ -0.16
Smc5Q8CG46 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.08□□□□□ -0.16
Smc5Q8CG46 Gm42588-201ENSMUST00000200538 1297 ntBASIC14.08□□□□□ -0.16
Smc5Q8CG46 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC14.08□□□□□ -0.16
Smc5Q8CG46 AC159002.1-201ENSMUST00000226714 924 ntBASIC14.08□□□□□ -0.16
Smc5Q8CG46 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 AC124732.3-201ENSMUST00000221835 1765 ntBASIC14.08□□□□□ -0.16
Smc5Q8CG46 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Gm37613-201ENSMUST00000195677 3580 ntBASIC14.08□□□□□ -0.16
Smc5Q8CG46 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.08□□□□□ -0.16
Smc5Q8CG46 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Gm26660-202ENSMUST00000223620 4112 ntBASIC14.08□□□□□ -0.16
Smc5Q8CG46 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smc5Q8CG46 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Smc5Q8CG46 Mup-ps29-201ENSMUST00000122281 202 ntBASIC14.07□□□□□ -0.16
Smc5Q8CG46 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms