Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ccdc28aQ8CEI3 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.02□□□□□ -0.48
Ccdc28aQ8CEI3 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ccdc28aQ8CEI3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.02□□□□□ -0.48
Ccdc28aQ8CEI3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc28aQ8CEI3 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc28aQ8CEI3 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ccdc28aQ8CEI3 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Gm12957-201ENSMUST00000117835 377 ntBASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Gm15207-201ENSMUST00000119259 442 ntBASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ccdc28aQ8CEI3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm18062-201ENSMUST00000208020 547 ntBASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm18055-201ENSMUST00000208254 547 ntBASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc28aQ8CEI3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms