Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Gm2965-201ENSMUST00000198365 343 ntBASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Gm45575-201ENSMUST00000210283 548 ntBASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Gm4978-201ENSMUST00000071565 801 ntBASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc38Q8CDN8 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Gm7150-201ENSMUST00000122032 981 ntBASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Gm6439-201ENSMUST00000199849 862 ntBASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Gm44008-201ENSMUST00000204345 412 ntBASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.75□□□□□ -0.37
Ccdc38Q8CDN8 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc38Q8CDN8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms