Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Gm26013-201ENSMUST00000104404 119 ntBASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Gm14892-201ENSMUST00000117636 267 ntBASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Mt1-202ENSMUST00000211807 1085 ntBASIC13.3□□□□□ -0.28
Alx1Q8C8B0 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Gm29787-201ENSMUST00000222129 849 ntBASIC13.3□□□□□ -0.28
Alx1Q8C8B0 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Gm23680-201ENSMUST00000083162 164 ntBASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx1Q8C8B0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.29□□□□□ -0.28
Alx1Q8C8B0 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.29□□□□□ -0.28
Alx1Q8C8B0 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Alx1Q8C8B0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Gm26134-201ENSMUST00000178484 110 ntBASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Gm17877-201ENSMUST00000192578 814 ntBASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx1Q8C8B0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms