Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Uba3Q8C878 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Uba3Q8C878 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Uba3Q8C878 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Uba3Q8C878 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Uba3Q8C878 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Uba3Q8C878 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Uba3Q8C878 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.02□□□□□ -0.48
Uba3Q8C878 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Uba3Q8C878 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Uba3Q8C878 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Uba3Q8C878 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Uba3Q8C878 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Uba3Q8C878 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Uba3Q8C878 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Uba3Q8C878 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Uba3Q8C878 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.02□□□□□ -0.48
Uba3Q8C878 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Uba3Q8C878 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Uba3Q8C878 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Uba3Q8C878 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.02□□□□□ -0.49
Uba3Q8C878 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Mir1943-201ENSMUST00000158276 73 ntBASIC12.02□□□□□ -0.49
Uba3Q8C878 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Uba3Q8C878 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.02□□□□□ -0.49
Uba3Q8C878 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.02□□□□□ -0.49
Uba3Q8C878 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Uba3Q8C878 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.02□□□□□ -0.49
Uba3Q8C878 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Uba3Q8C878 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Uba3Q8C878 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Uba3Q8C878 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Uba3Q8C878 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Uba3Q8C878 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.02□□□□□ -0.49
Uba3Q8C878 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Uba3Q8C878 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Uba3Q8C878 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Uba3Q8C878 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Uba3Q8C878 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.01□□□□□ -0.49
Uba3Q8C878 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.01□□□□□ -0.49
Uba3Q8C878 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.01□□□□□ -0.49
Uba3Q8C878 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Uba3Q8C878 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.01□□□□□ -0.49
Uba3Q8C878 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Uba3Q8C878 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Uba3Q8C878 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Uba3Q8C878 Gm8737-201ENSMUST00000122208 642 ntBASIC12.01□□□□□ -0.49
Uba3Q8C878 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.01□□□□□ -0.49
Uba3Q8C878 Gm15881-201ENSMUST00000148792 942 ntBASIC12.01□□□□□ -0.49
Uba3Q8C878 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.01□□□□□ -0.49
Uba3Q8C878 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.01□□□□□ -0.49
Uba3Q8C878 Gm43947-201ENSMUST00000203019 959 ntBASIC12.01□□□□□ -0.49
Uba3Q8C878 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.01□□□□□ -0.49
Uba3Q8C878 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.01□□□□□ -0.49
Uba3Q8C878 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.01□□□□□ -0.49
Uba3Q8C878 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.01□□□□□ -0.49
Uba3Q8C878 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.01□□□□□ -0.49
Uba3Q8C878 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Uba3Q8C878 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms