Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Mt1-202ENSMUST00000211807 1085 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.6□□□□□ -0.55
Sh3rf2Q8BZT2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm24992-201ENSMUST00000157412 130 ntBASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm8197-202ENSMUST00000193422 934 ntBASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm5298-201ENSMUST00000201122 892 ntBASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm39288-201ENSMUST00000210554 446 ntBASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.59□□□□□ -0.55
Sh3rf2Q8BZT2 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.58□□□□□ -0.55
Sh3rf2Q8BZT2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Sh3rf2Q8BZT2 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Gm8302-201ENSMUST00000119217 852 ntBASIC11.58□□□□□ -0.56
Sh3rf2Q8BZT2 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms