Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm15808-201ENSMUST00000119046 604 ntBASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm5733-201ENSMUST00000190232 939 ntBASIC11.24□□□□□ -0.61
Ccdc116Q80X53 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm18730-201ENSMUST00000218038 343 ntBASIC11.24□□□□□ -0.61
Ccdc116Q80X53 AC114573.1-201ENSMUST00000224120 1210 ntBASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.24□□□□□ -0.61
Ccdc116Q80X53 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ccdc116Q80X53 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm28195-201ENSMUST00000186992 372 ntBASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm37293-201ENSMUST00000191658 295 ntBASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm6439-201ENSMUST00000199849 862 ntBASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm44008-201ENSMUST00000204345 412 ntBASIC11.23□□□□□ -0.61
Ccdc116Q80X53 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ccdc116Q80X53 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Gm23200-201ENSMUST00000104379 132 ntBASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ccdc116Q80X53 Gm14539-201ENSMUST00000117527 174 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms