Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Mir7051-201ENSMUST00000184167 73 ntBASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Gm38210-201ENSMUST00000191944 809 ntBASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Gm10263-201ENSMUST00000085163 300 ntBASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ubfd1Q78JW9 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Gm8111-201ENSMUST00000117659 987 ntBASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Gm12274-201ENSMUST00000120062 385 ntBASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Gm21778-201ENSMUST00000178779 471 ntBASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Lect2-202ENSMUST00000225183 823 ntBASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ubfd1Q78JW9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.15□□□□□ -0.62
Ubfd1Q78JW9 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms