Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc2Q6PDG5 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Gm6439-201ENSMUST00000199849 862 ntBASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Gm44008-201ENSMUST00000204345 412 ntBASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Smarcc2Q6PDG5 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Gm8731-201ENSMUST00000118088 412 ntBASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Gm26047-201ENSMUST00000157308 113 ntBASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Gm26047-202ENSMUST00000198840 115 ntBASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Gm36940-201ENSMUST00000194281 2036 ntBASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc2Q6PDG5 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.33□□□□□ -0.27
Smarcc2Q6PDG5 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcc2Q6PDG5 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcc2Q6PDG5 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcc2Q6PDG5 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Smarcc2Q6PDG5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcc2Q6PDG5 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.33□□□□□ -0.27
Smarcc2Q6PDG5 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcc2Q6PDG5 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Gm22144-201ENSMUST00000157402 102 ntBASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.33□□□□□ -0.28
Smarcc2Q6PDG5 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms