Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Gm15636-201ENSMUST00000119205 668 ntBASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slx4Q6P1D7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Gm13608-201ENSMUST00000121807 1406 ntBASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Gm7833-201ENSMUST00000183288 990 ntBASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Gm3926-201ENSMUST00000223378 1123 ntBASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC17.34■□□□□ 0.37
Slx4Q6P1D7 AC103672.1-201ENSMUST00000227502 365 ntBASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slx4Q6P1D7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Gm5739-201ENSMUST00000208601 1703 ntBASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Mup-ps29-201ENSMUST00000122281 202 ntBASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Gm45090-201ENSMUST00000208775 1148 ntBASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 AC125409.3-201ENSMUST00000223488 653 ntBASIC17.33■□□□□ 0.37
Slx4Q6P1D7 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC17.33■□□□□ 0.37
Slx4Q6P1D7 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Slx4Q6P1D7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Slx4Q6P1D7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slx4Q6P1D7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slx4Q6P1D7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slx4Q6P1D7 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slx4Q6P1D7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Slx4Q6P1D7 Gm44806-201ENSMUST00000205574 2303 ntBASIC17.33■□□□□ 0.36
Slx4Q6P1D7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Slx4Q6P1D7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Slx4Q6P1D7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gm11473-201ENSMUST00000118980 359 ntBASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gm16228-201ENSMUST00000162286 809 ntBASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gm28671-201ENSMUST00000187036 692 ntBASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gm6677-201ENSMUST00000195100 441 ntBASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gm29689-201ENSMUST00000221076 589 ntBASIC17.32■□□□□ 0.36
Slx4Q6P1D7 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gm37858-201ENSMUST00000192759 1231 ntBASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gm33080-201ENSMUST00000205429 172 ntBASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 AC134913.2-201ENSMUST00000225017 771 ntBASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Gm5278-201ENSMUST00000055957 552 ntBASIC17.32■□□□□ 0.36
Slx4Q6P1D7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms