Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm28686-201ENSMUST00000187404 609 ntBASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm17812-201ENSMUST00000204935 318 ntBASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm18056-201ENSMUST00000207670 568 ntBASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm18061-201ENSMUST00000208350 562 ntBASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm18063-201ENSMUST00000208529 568 ntBASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm18052-201ENSMUST00000208750 559 ntBASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Mir433-201ENSMUST00000093564 124 ntBASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.63□□□□□ -0.39
Krt39Q6IFX4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Gm43184-201ENSMUST00000197247 542 ntBASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Gm44008-201ENSMUST00000204345 412 ntBASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.62□□□□□ -0.39
Krt39Q6IFX4 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.62□□□□□ -0.39
Krt39Q6IFX4 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Gm15207-201ENSMUST00000119259 442 ntBASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt39Q6IFX4 Gm2383-201ENSMUST00000181461 807 ntBASIC12.61□□□□□ -0.39
Krt39Q6IFX4 AY036118-201ENSMUST00000200021 923 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms