Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.26□□□□□ -0.29
Scn9aQ62205 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn9aQ62205 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm14592-201ENSMUST00000117201 560 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm6291-201ENSMUST00000179994 309 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm7833-201ENSMUST00000183288 990 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm44420-201ENSMUST00000203669 490 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm10581-201ENSMUST00000097986 231 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm37160-201ENSMUST00000193081 1689 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm5159-201ENSMUST00000212733 1652 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm5944-201ENSMUST00000118182 1001 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm12684-201ENSMUST00000118675 999 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm4917-201ENSMUST00000121452 650 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm16228-201ENSMUST00000162286 809 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm42867-201ENSMUST00000202995 469 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC13.25□□□□□ -0.29
Scn9aQ62205 AC125409.3-201ENSMUST00000223488 653 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC13.25□□□□□ -0.29
Scn9aQ62205 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn9aQ62205 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn9aQ62205 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scn9aQ62205 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.24□□□□□ -0.29
Scn9aQ62205 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scn9aQ62205 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC13.24□□□□□ -0.29
Scn9aQ62205 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC13.24□□□□□ -0.29
Scn9aQ62205 Gm4705-201ENSMUST00000177415 354 ntBASIC13.24□□□□□ -0.29
Scn9aQ62205 Mir8091-201ENSMUST00000183602 139 ntBASIC13.24□□□□□ -0.29
Scn9aQ62205 Gm5254-201ENSMUST00000188353 977 ntBASIC13.24□□□□□ -0.29
Scn9aQ62205 Gm43106-201ENSMUST00000199485 637 ntBASIC13.24□□□□□ -0.29
Scn9aQ62205 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.24□□□□□ -0.29
Scn9aQ62205 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC13.24□□□□□ -0.29
Scn9aQ62205 AC107711.4-201ENSMUST00000228948 440 ntBASIC13.24□□□□□ -0.29
Scn9aQ62205 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scn9aQ62205 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn9aQ62205 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms