Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
VcanQ62059 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
VcanQ62059 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.4□□□□□ -0.74
VcanQ62059 Gm24161-201ENSMUST00000104592 130 ntBASIC10.4□□□□□ -0.74
VcanQ62059 Gm5510-201ENSMUST00000117826 486 ntBASIC10.4□□□□□ -0.74
VcanQ62059 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Gm9574-201ENSMUST00000173127 845 ntBASIC10.4□□□□□ -0.74
VcanQ62059 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
VcanQ62059 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
VcanQ62059 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
VcanQ62059 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.4□□□□□ -0.74
VcanQ62059 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.4□□□□□ -0.74
VcanQ62059 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Gm12047-201ENSMUST00000117561 944 ntBASIC10.4□□□□□ -0.74
VcanQ62059 Gm13217-201ENSMUST00000120466 953 ntBASIC10.4□□□□□ -0.74
VcanQ62059 Gm38301-201ENSMUST00000195573 543 ntBASIC10.4□□□□□ -0.74
VcanQ62059 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.4□□□□□ -0.74
VcanQ62059 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
VcanQ62059 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
VcanQ62059 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
VcanQ62059 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC10.4□□□□□ -0.75
VcanQ62059 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
VcanQ62059 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.75
VcanQ62059 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
VcanQ62059 Gm26943-201ENSMUST00000182295 957 ntBASIC10.4□□□□□ -0.75
VcanQ62059 Mir8091-201ENSMUST00000183602 139 ntBASIC10.4□□□□□ -0.75
VcanQ62059 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
VcanQ62059 Gm19058-201ENSMUST00000192135 598 ntBASIC10.4□□□□□ -0.75
VcanQ62059 AC165260.2-201ENSMUST00000225371 395 ntBASIC10.4□□□□□ -0.75
VcanQ62059 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
VcanQ62059 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.4□□□□□ -0.75
VcanQ62059 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
VcanQ62059 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.39□□□□□ -0.75
VcanQ62059 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC10.39□□□□□ -0.75
VcanQ62059 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VcanQ62059 Gm17799-201ENSMUST00000183270 667 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC10.39□□□□□ -0.75
VcanQ62059 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
VcanQ62059 Gm4953-201ENSMUST00000077309 483 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.39□□□□□ -0.75
VcanQ62059 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
VcanQ62059 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
VcanQ62059 Gm12481-201ENSMUST00000102482 297 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC10.39□□□□□ -0.75
VcanQ62059 Gm16418-201ENSMUST00000118577 171 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Gm13002-201ENSMUST00000119286 682 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Gm15793-201ENSMUST00000121857 495 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Gm20281-201ENSMUST00000188225 267 ntBASIC10.39□□□□□ -0.75
VcanQ62059 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VcanQ62059 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms