Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rai1Q61818 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rai1Q61818 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rai1Q61818 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.93□□□□□ -0.66
Rai1Q61818 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rai1Q61818 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rai1Q61818 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rai1Q61818 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rai1Q61818 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rai1Q61818 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.93□□□□□ -0.66
Rai1Q61818 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.93□□□□□ -0.66
Rai1Q61818 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rai1Q61818 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rai1Q61818 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rai1Q61818 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rai1Q61818 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.92□□□□□ -0.66
Rai1Q61818 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Gm14113-201ENSMUST00000121399 976 ntBASIC10.92□□□□□ -0.66
Rai1Q61818 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.92□□□□□ -0.66
Rai1Q61818 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.92□□□□□ -0.66
Rai1Q61818 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.92□□□□□ -0.66
Rai1Q61818 Gm18010-201ENSMUST00000203553 202 ntBASIC10.92□□□□□ -0.66
Rai1Q61818 Gm6331-201ENSMUST00000217890 450 ntBASIC10.92□□□□□ -0.66
Rai1Q61818 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.92□□□□□ -0.66
Rai1Q61818 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 CT030135.2-201ENSMUST00000225255 893 ntBASIC10.92□□□□□ -0.66
Rai1Q61818 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.92□□□□□ -0.66
Rai1Q61818 Gm9791-201ENSMUST00000060997 447 ntBASIC10.92□□□□□ -0.66
Rai1Q61818 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rai1Q61818 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.92□□□□□ -0.66
Rai1Q61818 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rai1Q61818 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Rai1Q61818 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rai1Q61818 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rai1Q61818 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC10.92□□□□□ -0.66
Rai1Q61818 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Rai1Q61818 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.92□□□□□ -0.66
Rai1Q61818 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rai1Q61818 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rai1Q61818 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.91□□□□□ -0.66
Rai1Q61818 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.91□□□□□ -0.66
Rai1Q61818 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Rai1Q61818 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Gm7627-201ENSMUST00000183205 999 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Rai1Q61818 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC10.91□□□□□ -0.66
Rai1Q61818 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.91□□□□□ -0.66
Rai1Q61818 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.91□□□□□ -0.66
Rai1Q61818 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Prss23os-202ENSMUST00000179361 1362 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 143.3 ms