Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.63□□□□□ -0.39
Ift88Q61371 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ift88Q61371 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ift88Q61371 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ift88Q61371 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Ift88Q61371 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Ift88Q61371 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ift88Q61371 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ift88Q61371 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.63□□□□□ -0.39
Ift88Q61371 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.63□□□□□ -0.39
Ift88Q61371 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Gm7150-201ENSMUST00000122032 981 ntBASIC12.63□□□□□ -0.39
Ift88Q61371 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.63□□□□□ -0.39
Ift88Q61371 Mir7677-201ENSMUST00000184226 67 ntBASIC12.63□□□□□ -0.39
Ift88Q61371 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Gm270-201ENSMUST00000223010 976 ntBASIC12.63□□□□□ -0.39
Ift88Q61371 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Ift88Q61371 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.63□□□□□ -0.39
Ift88Q61371 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.63□□□□□ -0.39
Ift88Q61371 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ift88Q61371 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Ift88Q61371 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ift88Q61371 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ift88Q61371 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ift88Q61371 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.62□□□□□ -0.39
Ift88Q61371 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ift88Q61371 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Ift88Q61371 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ift88Q61371 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.62□□□□□ -0.39
Ift88Q61371 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ift88Q61371 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.62□□□□□ -0.39
Ift88Q61371 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ift88Q61371 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.62□□□□□ -0.39
Ift88Q61371 Gm26361-201ENSMUST00000158868 186 ntBASIC12.62□□□□□ -0.39
Ift88Q61371 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.62□□□□□ -0.39
Ift88Q61371 Gm44364-201ENSMUST00000198368 141 ntBASIC12.62□□□□□ -0.39
Ift88Q61371 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.62□□□□□ -0.39
Ift88Q61371 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.62□□□□□ -0.39
Ift88Q61371 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.62□□□□□ -0.39
Ift88Q61371 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ift88Q61371 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.62□□□□□ -0.39
Ift88Q61371 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
Ift88Q61371 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ift88Q61371 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ift88Q61371 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ift88Q61371 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.61□□□□□ -0.39
Ift88Q61371 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ift88Q61371 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Ift88Q61371 Gm12857-201ENSMUST00000117678 592 ntBASIC12.61□□□□□ -0.39
Ift88Q61371 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.61□□□□□ -0.39
Ift88Q61371 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.61□□□□□ -0.39
Ift88Q61371 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.61□□□□□ -0.39
Ift88Q61371 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.61□□□□□ -0.39
Ift88Q61371 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.61□□□□□ -0.39
Ift88Q61371 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.61□□□□□ -0.39
Ift88Q61371 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ift88Q61371 Gm18038-201ENSMUST00000197900 485 ntBASIC12.61□□□□□ -0.39
Ift88Q61371 Gm43758-201ENSMUST00000199500 367 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms