Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
ClpbQ60649 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
ClpbQ60649 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
ClpbQ60649 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
ClpbQ60649 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11□□□□□ -0.65
ClpbQ60649 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11□□□□□ -0.65
ClpbQ60649 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Gm7841-201ENSMUST00000122108 1629 ntBASIC11□□□□□ -0.65
ClpbQ60649 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11□□□□□ -0.65
ClpbQ60649 n-R5s14-201ENSMUST00000122688 107 ntBASIC11□□□□□ -0.65
ClpbQ60649 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Mir1943-201ENSMUST00000158276 73 ntBASIC11□□□□□ -0.65
ClpbQ60649 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11□□□□□ -0.65
ClpbQ60649 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11□□□□□ -0.65
ClpbQ60649 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11□□□□□ -0.65
ClpbQ60649 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11□□□□□ -0.65
ClpbQ60649 AC154276.3-201ENSMUST00000227643 998 ntBASIC11□□□□□ -0.65
ClpbQ60649 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Gm10254-201ENSMUST00000052888 867 ntBASIC11□□□□□ -0.65
ClpbQ60649 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
ClpbQ60649 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Gm21939-201ENSMUST00000221137 2773 ntBASIC11□□□□□ -0.65
ClpbQ60649 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
ClpbQ60649 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11□□□□□ -0.65
ClpbQ60649 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Gm43860-201ENSMUST00000201742 2705 ntBASIC11□□□□□ -0.65
ClpbQ60649 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ClpbQ60649 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
ClpbQ60649 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.99□□□□□ -0.65
ClpbQ60649 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
ClpbQ60649 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
ClpbQ60649 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm15566-201ENSMUST00000121130 590 ntBASIC10.99□□□□□ -0.65
ClpbQ60649 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.99□□□□□ -0.65
ClpbQ60649 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm6450-201ENSMUST00000200896 574 ntBASIC10.99□□□□□ -0.65
ClpbQ60649 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.99□□□□□ -0.65
ClpbQ60649 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.99□□□□□ -0.65
ClpbQ60649 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.99□□□□□ -0.65
ClpbQ60649 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.99□□□□□ -0.65
ClpbQ60649 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
ClpbQ60649 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
ClpbQ60649 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
ClpbQ60649 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
ClpbQ60649 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
ClpbQ60649 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClpbQ60649 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms