Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav5d-4Q5R1F6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm24891-201ENSMUST00000104391 136 ntBASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm14028-201ENSMUST00000117434 479 ntBASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm12579-201ENSMUST00000118040 783 ntBASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm24990-201ENSMUST00000157406 323 ntBASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm23085-201ENSMUST00000157849 293 ntBASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm5733-201ENSMUST00000190232 939 ntBASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav5d-4Q5R1F6 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav5d-4Q5R1F6 Gm13263-201ENSMUST00000121271 838 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms