Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm42460-201ENSMUST00000198863 2567 ntBASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Auts2-212ENSMUST00000178555 309 ntBASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Gm2423-201ENSMUST00000074863 733 ntBASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav3-3Q5R1C3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm43633-201ENSMUST00000202455 2330 ntBASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm15806-201ENSMUST00000120696 955 ntBASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm6244-201ENSMUST00000178732 841 ntBASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm27892-201ENSMUST00000185017 106 ntBASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm19163-201ENSMUST00000223313 780 ntBASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm10012-201ENSMUST00000078252 192 ntBASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Gm37264-201ENSMUST00000194916 2192 ntBASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC8.56□□□□□ -1.04
Trav3-3Q5R1C3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms