Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Olfr584-201ENSMUST00000098210 964 ntBASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm5641-201ENSMUST00000091130 1488 ntBASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp48Q3V0C5 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Gm11560-201ENSMUST00000117567 948 ntBASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Gm14270-201ENSMUST00000118388 846 ntBASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Gm38117-201ENSMUST00000194653 939 ntBASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Gm42816-201ENSMUST00000198433 325 ntBASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Gm8574-201ENSMUST00000203207 924 ntBASIC14.21□□□□□ -0.13
Usp48Q3V0C5 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp48Q3V0C5 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp48Q3V0C5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp48Q3V0C5 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp48Q3V0C5 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Usp48Q3V0C5 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp48Q3V0C5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Usp48Q3V0C5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.21□□□□□ -0.14
Usp48Q3V0C5 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Gm11578-201ENSMUST00000118530 459 ntBASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Gm9507-202ENSMUST00000180157 654 ntBASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Gm7719-201ENSMUST00000182374 975 ntBASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Gm7430-201ENSMUST00000193824 1144 ntBASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Gm43371-201ENSMUST00000202838 1031 ntBASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Gm29763-201ENSMUST00000205306 616 ntBASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Gm6108-201ENSMUST00000208365 367 ntBASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Gm40879-201ENSMUST00000220759 612 ntBASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Gm18968-201ENSMUST00000221319 862 ntBASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 AC154849.3-201ENSMUST00000223733 1660 ntBASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp48Q3V0C5 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Usp48Q3V0C5 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms