Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Dopey2-207ENSMUST00000227156 7340 ntBASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdkl5Q3UTQ8 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Gm22711-201ENSMUST00000116890 133 ntBASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Gm7504-201ENSMUST00000201449 424 ntBASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cdkl5Q3UTQ8 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm7666-201ENSMUST00000146631 819 ntBASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm2517-201ENSMUST00000215651 348 ntBASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.22□□□□□ -0.29
Cdkl5Q3UTQ8 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms