Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 AC127583.1-201ENSMUST00000224351 540 ntBASIC10.49□□□□□ -0.73
Spg11Q3UHA3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.49□□□□□ -0.73
Spg11Q3UHA3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Gm13071-201ENSMUST00000122237 376 ntBASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Spg11Q3UHA3 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm15570-201ENSMUST00000122093 625 ntBASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 AC163646.3-202ENSMUST00000228685 691 ntBASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm6378-201ENSMUST00000084199 444 ntBASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm5421-201ENSMUST00000181698 2354 ntBASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC10.48□□□□□ -0.73
Spg11Q3UHA3 Gm6038-201ENSMUST00000154310 948 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms